Publications

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Journal Article
Shabana, KM, Nazeer AKA, Pradhan M, Palakal M.  2015.  A computational method for drug repositioning using publicly available gene expression data. BMC Bioinformatics. 16 (Suppl 17): S5Website
P. Shamna, V.K. Govindan, ANKA.  2018.  Content-based medical image retrieval by spatial matching of visual words. Elsevier Journal of King Saud University –Computer and Information Sciences. (In Press)
Visakh, R, AbdulNazeer KA.  2018.  DEEPAligner: Deep encoding of pathways to align epigenetic signatures. Elsevier International Journal of Computational Biology and Chemistry. 72:87-95.
Nidheesh, N, Nazeer A, Ameer PM.  2017.  An enhanced deterministic K-Means clustering algorithm for cancer subtype prediction from gene expression data. Elsevier International Journal of Computers in Biology and Medicine. 91:213-221.
AbdulNazeer, KA, Rafeeque PC, MPSebastian.  2008.  An Enhanced Method for Mining Acronym-Definition Pairs from Bioinformatics Literature. International Journal of Information Processing. 2(2):98-105.
Jeena, K, AbdulNazeer KA.  2020.  An enhanced Tree-LSTM architecture for sentence semantic modeling using typed dependencies. Information Processing & Management 57 (6), 102362.
AbdulNazeer, KA, MPSebastian, MadhuKumar SD.  2011.  A Heuristic K-Means Algorithm with Better Accuracy and Efficiency for Clustering Health Informatics Data. International Journal of Medical Imaging and Health Informatics. 1(1):66-71.
Nidheesh, N, AbdulNazeer KA, Ameer PM.  2019.  A Hierarchical Clustering algorithm based on Silhouette Index for cancer subtype discovery from genomic data. Neural Computing and Application, Springer.. ISSN 0941-0643:1-18.
Visakh, R, AbdulNazeer KA.  2016.  Identifying Epigenetically Dysregulated Pathways from Pathway-Pathway Interaction networks. Elsevier International Journal of Computers in Biology and Medicine. 76:160-167.
Visakh, R, AbdulNazeer KA.  2019.  Multi-network approach to identify differentially methylated gene communities in cancer. Gene. 697:227-237.
Das, P, Nazeer AKA.  2018.  A novel clustering method to identify cell types from single cell transcriptional profiles. Procedia Computer Science. 132:983-992.
AbdulNazeer, KA, MPSebastian, MadhuKumar SD.  2013.  A Novel Harmony Search-K means Hybrid Algorithm for Clustering Gene Expression Data. Bioinformation. 9(2):84-88.Website
C, MK, Nazeer AKA.  2022.  Repurposing Ayush-64 for COVID-19: A Computational Study Based on Network Pharmacology and Molecular Docking. Combinatorial Chemistry and High Throughput Screening. 25(12)
Conference Paper
Kaur, J, Nazeer KAA.  2018.  An improved Clustering Algorithm based onFuzzy C-means and Artificial Bee Colony Optimization, September 2018. International Conference on Computing, Power and Communication Technologies (GUCON) . , Noida, India
Anu, B, Nazeer KAA.  2018.  An Improved Clustering Algorithm Based onk-Means and Artificial Bee ColonyOptimization for Datasets that Contain Outliers, September 2018. 2018 International Conference on Computing, Power and Communication Technologies (GUCON) . , Noida, India
Lavanya, S, Nazeer KAA.  2018.  An Improved Computational Linguistic Approachfor Fine-Grained Sentiment Analysis of TextualReviews, September 2018. 2018 International Conference on Computing, Power and Communication Technologies (GUCON) . , Noida, India
Rakshmy, CS, AbdulNazeer KA, Chandra SSV.  2012.  Bio-M: Data Mining on HCV Genotype 1 Core Sequences. International Conference on Data Science and Engineering. , Cochin
Preeja, V, AbdulNazeer KA, Chandra SSV.  2012.  Common Structural Motif Identification in Genomic Sequences. International Conference on Data Science and Engineering. , Cochin
Mahija, KC, Kadol S, AbdulNazeer KA.  2020.  Computational Investigation of Arjunarishta Formulation using Module-Network Analysis. 2020 Advanced Computing and Communication Technologies for High Performance Applications. , Kerala, India
Shabana, KM, AbdulNazeer KA.  2014.  A Computational Method for Drug Repositioning using Publicly Available Gene Expression Data. 4th IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS-2014). , Florida, USA
Siyad, M, Visakh R, Nazeer A.  2017.  Disease Prediction using Optimal Feature Selection from Epigenetic Data, April 2017. International Conference on Innovations in Power and Advanced Computing Technologies [i-PACT2017]. , Vellore, India
AbdulNazeer, KA, MadhuKumar SD, MPSebastian.  2011.  Enhancing the K-Means Clustering Algorithm by using a O(n logn) Heuristic Method for Finding Better Initial Centroids. International Conference on Emerging Applications of Information Technology- EAIT 2011. , Kolkata, India
Sithara, EP, AbdulNazeer KA.  2016.  A Hybrid K - H armonic Means with ABC Clustering Algorithm using an Optimal k value for High Performance Clustering. International Conference on Computing and Communication. , Kothamangalam
Maheswari, K, Jeena KK, AbdulNazeer KA.  2019.  Identifying synonyms in bigram phrases using Compositional DSM and Artificial Neural Network. Int. Conf. on Computing, Power and Communication Technologies (GUCON). , Noida, India
Muhammad, S, AbdulNazeer KA.  2013.  An Improv ed Method for Extracting Acronym-Definition Pairs From Biomedical Literature. International Conference on Control, Communication and Computing. , Trivandrum