Publications

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Journal Article
Visakh, R, AbdulNazeer KA.  2018.  DEEPAligner: Deep encoding of pathways to align epigenetic signatures. Elsevier International Journal of Computational Biology and Chemistry. 72:87-95.
Nidheesh, N, Nazeer A, Ameer PM.  2017.  An enhanced deterministic K-Means clustering algorithm for cancer subtype prediction from gene expression data. Elsevier International Journal of Computers in Biology and Medicine. 91:213-221.
AbdulNazeer, KA, Rafeeque PC, MPSebastian.  2008.  An Enhanced Method for Mining Acronym-Definition Pairs from Bioinformatics Literature. International Journal of Information Processing. 2(2):98-105.
Jeena, K, AbdulNazeer KA.  2020.  An enhanced Tree-LSTM architecture for sentence semantic modeling using typed dependencies. Information Processing & Management 57 (6), 102362.
AbdulNazeer, KA, MPSebastian, MadhuKumar SD.  2011.  A Heuristic K-Means Algorithm with Better Accuracy and Efficiency for Clustering Health Informatics Data. International Journal of Medical Imaging and Health Informatics. 1(1):66-71.
Nidheesh, N, AbdulNazeer KA, Ameer PM.  2019.  A Hierarchical Clustering algorithm based on Silhouette Index for cancer subtype discovery from genomic data. Neural Computing and Application, Springer.. ISSN 0941-0643:1-18.
Visakh, R, AbdulNazeer KA.  2016.  Identifying Epigenetically Dysregulated Pathways from Pathway-Pathway Interaction networks. Elsevier International Journal of Computers in Biology and Medicine. 76:160-167.
Visakh, R, AbdulNazeer KA.  2019.  Multi-network approach to identify differentially methylated gene communities in cancer. Gene. 697:227-237.
AbdulNazeer, KA, MPSebastian, MadhuKumar SD.  2013.  A Novel Harmony Search-K means Hybrid Algorithm for Clustering Gene Expression Data. Bioinformation. 9(2):84-88.Website
Conference Paper
Anu, B, Nazeer KAA.  2018.  An Improved Clustering Algorithm Based onk-Means and Artificial Bee ColonyOptimization for Datasets that Contain Outliers, September 2018. 2018 International Conference on Computing, Power and Communication Technologies (GUCON) . , Noida, India
Rakshmy, CS, AbdulNazeer KA, Chandra SSV.  2012.  Bio-M: Data Mining on HCV Genotype 1 Core Sequences. International Conference on Data Science and Engineering. , Cochin
Preeja, V, AbdulNazeer KA, Chandra SSV.  2012.  Common Structural Motif Identification in Genomic Sequences. International Conference on Data Science and Engineering. , Cochin
Mahija, KC, Kadol S, AbdulNazeer KA.  2020.  Computational Investigation of Arjunarishta Formulation using Module-Network Analysis. 2020 Advanced Computing and Communication Technologies for High Performance Applications. , Kerala, India
Shabana, KM, AbdulNazeer KA.  2014.  A Computational Method for Drug Repositioning using Publicly Available Gene Expression Data. 4th IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS-2014). , Florida, USA
AbdulNazeer, KA, MadhuKumar SD, MPSebastian.  2011.  Enhancing the K-Means Clustering Algorithm by using a O(n logn) Heuristic Method for Finding Better Initial Centroids. International Conference on Emerging Applications of Information Technology- EAIT 2011. , Kolkata, India
Sithara, EP, AbdulNazeer KA.  2016.  A Hybrid K - H armonic Means with ABC Clustering Algorithm using an Optimal k value for High Performance Clustering. International Conference on Computing and Communication. , Kothamangalam
Maheswari, K, Jeena KK, AbdulNazeer KA.  2019.  Identifying synonyms in bigram phrases using Compositional DSM and Artificial Neural Network. Int. Conf. on Computing, Power and Communication Technologies (GUCON). , Noida, India
Muhammad, S, AbdulNazeer KA.  2013.  An Improv ed Method for Extracting Acronym-Definition Pairs From Biomedical Literature. International Conference on Control, Communication and Computing. , Trivandrum
AbdulNazeer, KA, Lakshmi CP.  2011.  An Improved Clustering Algorithm based on K-Means and Harmony Search Optimization. International Conference on Recent Advances in Intelligent Computational Systems. , Thiruvananthapuram, India
Christina, J, AbdulNazeer KA.  2014.  An Improved ICPACA based K-means algorithm with self determined centroids. International Conference on Data Science and Engineering (ICDSE). , CUSAT, Kochi
Anitha, MA, Nazeer AKA.  2017.  Improved Parallel Clustering with Optimal Initial Centroids, March 2017. International Conference on Recent Advances in Electronics and Communication Technology. , Bangalore, India
AbdulNazeer, KA, MPSebastian.  2009.  Improving the Accuracy and Efficiency of the k-means Clustering Algorithm. International Conference on Data Mining and Knowledge Engineering, World Congress on Engineering. , Lodon, UK
Sreekala, S, AbdulNazeer KA.  2014.  A Literature Search Tool for Identifying Disease-associated Genes using Hidden Markov Model. International Conference on Computational Systems and Communications (ICCSC). , Trivandrum
Ansu, F, AbdulNazeer KA.  2016.  Literature Search Tool for the Extraction of Disease Associated Genes using Frequent Itemset Mining, December 2016. International Conference on Computing, Analytics and Security Trends (CAST 2016). , Pune, India
Arunanand, TA, AbdulNazeer KA.  2014.  A Nature-inspired Hybrid Fuzzy C-Means Algorithm for Better Clustering of Biological Data Sets. International Conference on Data Science and Engineering (ICDSE). , CUSAT, Kochi