Publications

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2022
MB, B, Jayaraj PB.  2022.  Cervix type detection using a self‐supervision boosted object detection technique. International Journal of Imaging Systems and Technology. :1-10.
Viswajit Vinod Nair, Jayaraj, et al.  2022.  Deep Sequence Models for Ligand-Based Virtual Screening. Journal of Computational Biophysics and Chemistry. :1-12.
A, JV, B JP.  2022.  An End-to-End Deep Learning Pipeline for Assigning Secondary Structure in Proteins. Journal of Computational Biophysics and Chemistry . :1-14.
Jayaraj, PB, et al.  2022.  Ligand Based Virtual Screening Using Self-organizing Maps. The Protein Journal. :1-11.
Francis, S, B JP.  2022.  ThoraxNet: a 3D U-Net based two-stage framework for OAR segmentation on thoracic CT images. Physical and Engineering Sciences inMedicine. :1-15.
2021
Francis, Seenia, JPB, et al.  2021.  Monte Carlo Simulation of Linear Accelerator for Dosimetry Analysis. . , April 4. In: 2021 6th International Conference for Convergence in Technology (I2CT). IEEE,. , Mumbai
Antony, J. V., MYJPHPB.  2021.  Assigning secondary structure in proteins using AI. Journal of Molecular Modeling. 27(9):1-13.
SUNNY, Sharon; JAYARAJ, PB.  2021.  FPDock: Protein–protein docking using flower pollination algorithm . Computational Biology and Chemistry. 93:107518.
Sunny, S, B JP.  2021.  A Geometric Complementarity-Based Tool for Protein–Protein Docking.. " Journal of Computational Biophysics and Chemistry . :2250003.
JISNA, JAYARAJVA; PB.  2021.  Protein structure prediction: conventional and deep learning perspectives. The Protein Journal. 40(4):522-544.
Sunny, S., JPB.  2021.  Protein–Protein Docking: Past, Present, and Future. The protein journal. :1-26.
2020
Limnadas P, Jayaraj P B, et al.  2020.  Early Detection of Covid-19 on CT Scans Using Deep Learning Techniques, Oct 14. in Fourth International Conference on Computing and Network Communications (CoCoNet'20), India. , Vellure, India
Jayaraj, et al.  2020.  Towards Protein Tertiary Structure Prediction using LSTM/BLSTM), Oct 14. in Fourth International Conference on Computing and Network Communications (CoCoNet'20), India . , Vellure, India: Springer
P. B Jayaraj, K Mithun, GJUCG.  2020.  A GPU based Virtual Screening Tool Using SOM. International Journal of Computational Biology and Drug Design (IJCBDD), Indersciene.
2019
Jayaraj, SS&, et al.  2019.  An Improved Protein-Protein Docking Technique Using Multilevel Scoring Function, Oct 20. IEEE Region 10 Conference (TENCON), Kochi, India, 2019. , Kochi
and P.B, BJMB, et al.  2019.  Segmentation Based Preprocessing Techniques for Predicting the Cervix Type Using Neural Networks, Nov 9. Computational Vision and Bio-Inspired Computing. ICCVBIC 2019. Advances in Intelligent Systems and Computing.
and B, RRJP, et al.  2019.  Odd-Even Based Adaptive Two-way Routing in Mesh NoCs for Hotspot Mitigation, January 5. In International Conference on Distributed Computing and Net-working (ICDCN ’19). , IISc, Bangalore, India.
M. B Bijoy, J& PB, et al.  2019.  Detecting Cervix Type Using Deep Learning and GPU, Dec 9. 6th IEEE Region 10 Humanitarian Technology Conference 2018. , SriLanka
Samyak, J&.  2019.  Ligand based Virtual Screening using SVM on GPU. Computational Biology and Chemistry, Elsevier. 83(83):107142.
2018
Avinash kumar, J& PB, et al.  2018.  Early Detection of breast cancer using SVM with SMO algorithm, December 22. 3rd International Conference on Advanced Computing and Intelligent Engineering, Springer. , Bubhaneswar, India
Jisna Antony, J& PB, et al.  2018.  Towards Building a Coordinate Clustered Library for Template-Based Modeling of Protein Structures, Dec 8. IEEE Recent Advances in Intelligent Computational Systems (RAICS).
2016
B, JP, K R, G G.  2016.  A Data parallel maximum common subgraph algorithm for Drug discovery applications, 23 MAY. IPDPS 2016. , Hyatt Hotel, Chicago, USAIPDPS 2016.pdf
Jayaraj, PB.  2016.  GPU BASED VIRTUAL SCREENING TECHNIQUES FOR FASTER DRUG DISCOVERY. , Calicut, Kerala, India: NIT Calicut
B, JP, mathias A, Nufail M, Gopakumar G, Jaleel UC.  2016.  GPURFSCREEN: A GPU based virtual screening tool using Random Forest Classifier. Journal of Cheminformatics . 8(12):1-13.gpurfscreen_published_copy.pdf
2014
Jayaraj, PB, Shijith T, Gopakumar G.  2014.  Finding hub proteins and their interactions in a Protein-Protein Interaction Network Using GPU, 28 July. International Conference on Emerging Trends in Drug Discovery - AICADD 2014, Amritha, Coimbatore. , Coimbatore, TN, Indiashijith.pdf